HMP: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP

Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.

Version: 1.6
Depends: R (≥ 3.1.0), dirmult
Imports: ggplot2, stats, foreach, doParallel, MASS, vegan, gplots, rpart, rpart.plot, parallel, graphics, lattice
Published: 2018-10-31
Author: Patricio S. La Rosa, Elena Deych, Sharina Carter, Berkley Shands, Dake Yang, William D. Shannon
Maintainer: Berkley Shands <rpackages at biorankings.com>
License: Apache License (== 2.0)
NeedsCompilation: no
Materials: NEWS
CRAN checks: HMP results

Downloads:

Reference manual: HMP.pdf
Package source: HMP_1.6.tar.gz
Windows binaries: r-devel: HMP_1.6.zip, r-release: HMP_1.6.zip, r-oldrel: HMP_1.6.zip
OS X binaries: r-release: HMP_1.6.tgz, r-oldrel: HMP_1.6.tgz
Old sources: HMP archive

Reverse dependencies:

Reverse imports: HMPTrees

Linking:

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